Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	83606
Gene Name:	guanylyl cyclase domain containing 1
Gene Aliases:	C22orf13, LLN4
Location:	Chr.22:24540423-24555935 on Build GRCh38
Assay Gene Location:	Within Intron 5

Gene Symbol	Transcript Accession	Protein ID
GUCD1	NM_001284251.1	NP_001271180.1
	NM_001284252.1	NP_001271181.1
	NM_001284253.1	NP_001271182.1
	NM_001284254.1	NP_001271183.1
	NM_001284255.1	NP_001271184.1
	NM_001284256.1	NP_001271185.1
	NM_001284257.1	NP_001271186.1
	NM_031444.3	NP_113632.2
	NR_104286.1
	XM_005261761.1	XP_005261818.1
	AK054681.1	BAB70791.1
	AK098754.1
	AK294972.1
	AK296893.1
	BC002924.2	AAH02924.2
	BC053529.1	AAH53529.1
	BC070109.1	AAH70109.1
	BQ893876.1
	BU153022.1
	BX346077.2
	DA033557.1
	HY059446.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2724068	Chr.22:24288741 - 24669870 on Build GRCh38	Deletion	POM121L10P ADORA2A-AS1 BCRP3 SNRPD3 GGT1 GUCD1 ADORA2A UPB1 SPECC1L-ADORA2A LRRC75B SPECC1L
dgv8039n54	Chr.22:23323169 - 24601506 on Build GRCh38	Gain	PCAT14 MMP11 VPREB3 C22orf15 GGT1 DDT GUCD1 LOC107985559 SPECC1L GUSBP11 POM121L9P ADORA2A-AS1 ZNF70 SUSD2 LOC107985555 UPB1 SPECC1L-ADORA2A CABIN1 CES5AP1 LOC388882 SLC2A11 LOC101929374 ZDHHC8P1 SMARCB1 MIF MIF-AS1 ADORA2A DERL3 DDTL IGLL1 LOC100652871 SNRPD3 GSTT2 CHCHD10 DRICH1 LRRC75B RGL4 GSTTP1 GGT5 GSTT2B
nsv1057819	Chr.22:24290518 - 24624081 on Build GRCh38	Gain	ADORA2A-AS1 SNRPD3 GGT1 GUCD1 ADORA2A UPB1 SPECC1L-ADORA2A LRRC75B SPECC1L
nsv526567	Chr.22:23348138 - 24600663 on Build GRCh38	Gain	PCAT14 MMP11 VPREB3 C22orf15 GGT1 DDT GUCD1 LOC107985559 SPECC1L GUSBP11 POM121L9P ADORA2A-AS1 ZNF70 SUSD2 LOC107985555 UPB1 SPECC1L-ADORA2A CABIN1 CES5AP1 LOC388882 SLC2A11 LOC101929374 ZDHHC8P1 SMARCB1 MIF MIF-AS1 ADORA2A DERL3 DDTL IGLL1 LOC100652871 SNRPD3 GSTT2 CHCHD10 DRICH1 LRRC75B RGL4 GSTTP1 GGT5 GSTT2B
esv2724041	Chr.22:23315914 - 24669376 on Build GRCh38	Deletion	PCAT14 MMP11 VPREB3 C22orf15 GGT1 DDT GUCD1 LOC107985559 SPECC1L GUSBP11 POM121L9P POM121L10P ADORA2A-AS1 ZNF70 SUSD2 BCR LOC107985555 UPB1 SPECC1L-ADORA2A CABIN1 CES5AP1 LOC388882 SLC2A11 LOC101929374 ZDHHC8P1 SMARCB1 MIF MIF-AS1 ADORA2A DERL3 DDTL IGLL1 LOC100652871 BCRP3 SNRPD3 GSTT2 CHCHD10 DRICH1 LRRC75B RGL4 GSTTP1 GGT5 GSTT2B
nsv1055830	Chr.22:24005071 - 24643213 on Build GRCh38	Gain	GGT1 GUCD1 ADORA2A SPECC1L POM121L9P ADORA2A-AS1 SUSD2 BCRP3 SNRPD3 UPB1 SPECC1L-ADORA2A CABIN1 LRRC75B GSTTP1 GGT5
esv3893463	Chr.22:24009046 - 24601506 on Build GRCh38	Gain	GGT1 GUCD1 ADORA2A SPECC1L POM121L9P ADORA2A-AS1 SUSD2 SNRPD3 UPB1 SPECC1L-ADORA2A CABIN1 LRRC75B GGT5
dgv4528n100	Chr.22:23322244 - 24682765 on Build GRCh38	Gain	PCAT14 MMP11 VPREB3 C22orf15 GGT1 DDT GUCD1 LOC107985559 SPECC1L GUSBP11 POM121L9P POM121L10P ADORA2A-AS1 ZNF70 SUSD2 LOC107985555 UPB1 SPECC1L-ADORA2A CABIN1 CES5AP1 LOC388882 SLC2A11 LOC101929374 ZDHHC8P1 SMARCB1 MIF MIF-AS1 ADORA2A DERL3 DDTL IGLL1 LOC100652871 BCRP3 SNRPD3 GSTT2 CHCHD10 DRICH1 LRRC75B RGL4 GSTTP1 GGT5 GSTT2B
nsv588744	Chr.22:24285587 - 24617379 on Build GRCh38	Gain	ADORA2A-AS1 SNRPD3 GGT1 GUCD1 ADORA2A UPB1 SPECC1L-ADORA2A LRRC75B SPECC1L
nsv9884	Chr.22:24415625 - 24662249 on Build GRCh38	Gain+Loss	POM121L10P ADORA2A-AS1 BCRP3 SNRPD3 GGT1 GUCD1 ADORA2A UPB1 SPECC1L-ADORA2A LRRC75B SPECC1L
esv3575443	Chr.22:23348201 - 24670505 on Build GRCh38	Gain	PCAT14 MMP11 VPREB3 C22orf15 GGT1 DDT GUCD1 LOC107985559 SPECC1L GUSBP11 POM121L9P POM121L10P ADORA2A-AS1 ZNF70 SUSD2 LOC107985555 UPB1 SPECC1L-ADORA2A CABIN1 CES5AP1 LOC388882 SLC2A11 LOC101929374 ZDHHC8P1 SMARCB1 MIF MIF-AS1 ADORA2A DERL3 DDTL IGLL1 LOC100652871 BCRP3 SNRPD3 GSTT2 CHCHD10 DRICH1 LRRC75B RGL4 GSTTP1 GGT5 GSTT2B

More Information

Additional Information:

For this assay, SNP(s) [rs115115477] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.