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Catalog Number | No. of Reactions |
---|---|
11752048 | 48 Reactions |
11752096 | 96 Reactions |
11752192 | 192 Reactions |
11752384 | 384 Reactions |
11752480 | 480 Reactions |
The Invitrogen SuperScript IV Single Cell/Low Input cDNA PreAmp Kit is designed for efficient cDNA synthesis and amplification directly from intact single cells (1–1,000) or low amounts of total RNA (2 pg–10 ng). It contains all required components to perform cell lysis, reverse transcription (RT), and PCR amplification in a convenient premixed format. A combination of superior enzymes (SuperScript IV Reverse Transcriptase and Platinum SuperFi U DNA Polymerase) enables high yields, sensitivity, and accuracy. Due to the short reaction times and minimal hands-on time, this simple one-tube preamplification protocol can be completed in just over two hours. The high quality global cDNA obtained can be used for next-generation sequencing (NGS) applications or for gene expression analysis by real-time PCR.
Features of the SuperScript IV Single Cell/Low Input cDNA PreAmp Kit include:
• Superior sensitivity for easy detection of low abundant targets (as low as single cell or 2 pg total RNA)
• High quality cDNA for full-length transcript information with uniform coverage
• Streamlined workflow with simple one-tube protocol
• Short lysis and reverse transcription times for time savings
• Global preamplification compatible with downstream analysis by NGS or real-time PCR
The SuperScript IV Single Cell/Low Input cDNA PreAmp Kit leverages the terminal deoxynucleotidyl transferase (TdT) activity of the SuperScript IV Reverse Transcriptase. Capturing oligonucleotide containing oligo(dT) and adapter sequences is used as primer for selective first strand cDNA synthesis from poly(A)-containing RNAs. When the reverse transcriptase reaches the 5‘ end of the RNA template, TdT activity adds 1–3 extra nucleotides to the cDNA end, enabling template switching and ligation-free incorporation of adapter sequence in the 3‘ end of the resulting cDNA. The high sensitivity and template switching efficiency of SuperScript IV Reverse Transcriptase allow the capture of even low-abundance targets.
Adapter sequences incorporated in both ends of the cDNA serve as primer-binding sites in the subsequent PCR amplification step, allowing global preamplification of the full-length templates. The included Platinum SuperFi U Preamplification Master Mix contains a superior high-fidelity DNA polymerase that ensures efficient amplification of long templates (up to 10 kb) with no PCR-induced bias or errors.
• 10X Lysis Buffer (48 μL)
• RNase Inhibitor (19 μL)
• Capturing Oligonucleotide (48 μL)
• 4X SuperScript IV cDNA Synthesis Master Mix (240 μL)
• Template Switching Oligonucleotide (48 μL)
• 2X Platinum SuperFi U Preamplification Master Mix (2 x 1.2 mL)
• Preamplification primer (48 μL)
• Nuclease-free water (2 x 1.25 mL)
Store at –15 to –25°C.
We recommend using TaqMan Fast Advanced Master Mix for all TaqMan‑based detection methods.
We recommend using PowerTrack SYBR Green Master Mix for all SYBR Green‑based detection methods.
Cycle number depends on sample type and input amount.
For example:
- 21 cycles for 2 pg of total RNA
- 18 cycles for 10 pg of total RNA, or single cells
- 15 cycles for 100 pg of total RNA, or up to 10 cells
- 11 cycles for 1-10 ng of total RNA, or 100–1,000 cells
- RNA quantity in cells can vary by cell type, cell cycle, and cell health. Optimization of the PCR cycle number may be needed to reach desired yields. An additional 2–3 cycles are required for smaller cells, such as Jurkat, Daudi, or peripheral blood mononuclear cells (PBMC).
The master mix includes Platinum SuperFi U DNA Polymerase. It provides the same benefits as Platinum SuperFi II DNA Polymerase, but is also compatible with uracil.
Lysis buffer is included in the kit, therefore intact mammalian cells can be used. Purification of total RNA is required for cDNA preamplification of RNA isolated from plant, fungi, or other cell wall‑containing organisms.
rRNA depletion or mRNA enrichment is not required, because only poly(A)‑containing RNA is amplified.
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