System Message

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Gene Symbol:
BRCA1
Entrez Gene ID
672
Gene Name:
BRCA1, DNA repair associated
Gene Aliases
BRCAI, BRCC1, BROVCA1, FANCS, IRIS, PNCA4, PPP1R53, PSCP, RNF53
Gene Chromosome Location
Chr.17: on Build GRCh38
UniGene
Hs.194143
Species:
Human
Primer Chromosome Location
Chr.17: 43093105-43093699 on Build GRCh38
Amplicon Length
595
Primer Sequences
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Ampliseq ID's
Primer ID Hs00447449_CE
Primer 5'-tail Option
Purification
Primer Pair /FWD/REV
Synthesis Scale 25 nmol
Availability Made To Order
Catalog #'s A15629,A15630
Price (USD) USD 16.46,USD 16.46

Genomic Map

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Assay Details

Gene Information


BRCA1
Accession Protein COSMIC ID Mutation AA
RefSeq NM_007294.3 NP_009225.1 6960734 c.1914A>T p.E638D
6948420 c.2222C>T p.S741F
1325057 c.2398A>T p.K800*
5888313 c.2180C>T p.P727L
4593792 c.1855C>A p.H619N
7345066 c.2141_2142insA p.N714fs*4
6946371 c.2222C>A p.S741Y
1290696 c.1883G>A p.S628N
35892 c.2169delT p.P724fs*12
148280 c.2082C>T p.S694S
7357697 c.2359G>T p.E787*
3190091 c.1988G>A p.S663N
6081262 c.2004C>T p.L668L
6943403 c.1942G>A p.E648K
5666492 c.2140A>G p.N714D
1383519 c.1961delA p.K654fs*47
3819700 c.2158G>T p.E720*
979741 c.1932T>G p.C644W
4989395 c.2077G>A p.D693N
5575249 c.2331T>A p.Y777*
6972019 c.2123C>G p.S708C
6925067 c.2181_2182delAA p.E729fs*10
148279 c.2426A>G p.E809G
1479615 c.1931_1933delGTT p.C644delC
6943401 c.1947G>T p.E649D
5430338 c.2270T>C p.V757A
6931524 c.1942G>T p.E648*
5010127 c.2205A>G p.L735L
6965200 c.2083G>A p.D695N
4478587 c.2250C>T p.L750L
1383517 c.2069A>G p.K690R
6942405 c.2347A>C p.I783L
23947 c.1960_1961insA p.Y655fs*18
3190087 c.2288C>T p.S763F
4130113 c.2072G>T p.R691I
979740 c.2017G>T p.E673*
6911599 c.2129C>T p.T710I
6945217 c.1961_1962insA p.Y655fs*18
33563 c.2332G>T p.G778C
5852613 c.2392C>T p.P798S
6937357 c.2338C>G p.Q780E
1740357 c.2225A>G p.N742S
6955235 c.2248C>A p.L750I
93978 c.2060A>C p.Q687P
309512 c.2379G>A p.K793K
6969016 c.1996C>A p.L666I
6980798 c.2055_2056insT p.E686fs*1
4475135 c.1965C>G p.Y655*
6932044 c.2253G>A p.M751I
23943 c.2269delG p.V757fs*8
3190085 c.2315T>C p.V772A
6931077 c.1945G>C p.E649Q
3755566 c.2311T>C p.L771L
6929392 c.2309C>T p.S770L
1383516 c.2215_2216insTA p.K739fs*15
7343729 c.1838G>A p.R613K
6914629 c.1942G>C p.E648Q
6455416 c.2185G>A p.E729K
219054 c.1961_1961delA p.K654fs*47
6923811 c.1924G>C p.D642H
33259 c.2274G>C p.L758F
5575488 c.2324C>A p.T775N
1521479 c.1866G>A p.A622A
7343752 c.2081G>A p.S694N
706224 c.2333G>A p.G778D
7357699 c.2355A>C p.L785F
5575442 c.1907G>T p.C636F
5731630 c.1888A>C p.N630H
4474118 c.1897C>T p.P633S
979742 c.1865C>T p.A622V
3190083 c.2351C>T p.S784L
7343727 c.2123C>T p.S708F
5628442 c.2356C>T p.L786L
6949150 c.1900C>T p.P634S
6987829 c.2170C>A p.P724T
NM_007297.3 NP_009228.2 - - -
NM_007298.3 NP_009229.2 - - -
NM_007299.3 NP_009230.2 - - -
NM_007300.3 NP_009231.2 7357696 c.2359G>T p.E787*
5171563 c.2215_2216insTA p.K739fs*15
3190082 c.2351C>T p.S784L
6931523 c.1942G>T p.E648*
6949149 c.1900C>T p.P634S
6987828 c.2170C>A p.P724T
3819699 c.2158G>T p.E720*
5888312 c.2180C>T p.P727L
5575487 c.2324C>A p.T775N
6911598 c.2129C>T p.T710I
4478586 c.2250C>T p.L750L
4867494 c.2017G>T p.E673*
6955234 c.2248C>A p.L750I
5575441 c.1907G>T p.C636F
6969015 c.1996C>A p.L666I
4864117 c.1932T>G p.C644W
4782351 c.2426A>G p.E809G
6932043 c.2253G>A p.M751I
6931076 c.1945G>C p.E649Q
3190090 c.1988G>A p.S663N
6929391 c.2309C>T p.S770L
4130112 c.2072G>T p.R691I
5010126 c.2205A>G p.L735L
6914628 c.1942G>C p.E648Q
6925066 c.2181_2182delAA p.E729fs*10
6937356 c.2338C>G p.Q780E
4783411 c.2069A>G p.K690R
4475134 c.1965C>G p.Y655*
6945216 c.1961_1962insA p.Y655fs*18
1740356 c.2225A>G p.N742S
6943402 c.1942G>A p.E648K
4860667 c.2333G>A p.G778D
6965199 c.2083G>A p.D695N
6455415 c.2185G>A p.E729K
3190086 c.2288C>T p.S763F
5852612 c.2392C>T p.P798S
5575248 c.2331T>A p.Y777*
3755567 c.2082C>T p.S694S
6960733 c.1914A>T p.E638D
6948419 c.2222C>T p.S741F
3387920 c.1865C>T p.A622V
6946370 c.2222C>A p.S741Y
6081261 c.2004C>T p.L668L
5430337 c.2270T>C p.V757A
4474117 c.1897C>T p.P633S
5210395 c.1931_1933delGTT p.C644delC
6980797 c.2055_2056insT p.E686fs*1
5666491 c.2140A>G p.N714D
7357698 c.2355A>C p.L785F
6943400 c.1947G>T p.E649D
5628441 c.2356C>T p.L786L
3190084 c.2315T>C p.V772A
6942404 c.2347A>C p.I783L
4593791 c.1855C>A p.H619N
5009866 c.1866G>A p.A622A
1640708 c.1961delA p.K654fs*47
6972018 c.2123C>G p.S708C
3755565 c.2311T>C p.L771L
3387919 c.2060A>C p.Q687P
4989394 c.2077G>A p.D693N
6923810 c.1924G>C p.D642H
NR_027676.1 - - -
GenBank AF005068.1 AAB61673.1 - - -
AF274503.1 - - -
AK307553.1 - - -
AK308084.1 - - -
AK316200.1 - - -
AY354539.2 AAQ92977.1 - - -
AY751490.1 AAU93634.1 - - -
BC012577.1 - - -
BC030969.1 - - -
BC038947.1 - - -
BC046142.1 - - -
BC062429.1 AAH62429.1 - - -
BC072418.1 AAH72418.1 - - -
BC085615.1 AAH85615.1 - - -
BC115037.1 AAI15038.1 - - -
DQ333386.1 - - -
DQ333387.1 - - -
DQ363751.1 - - -
ENST00000357654.0 - - -
JN686490.1 - - -
U14680.1 AAA73985.1 - - -
U64805.1 AAC00049.1 - - -


Phenotype

MIM: 113705

Literature Links:

BRCA1 PubMed Links

SNP ID

rs8176154 rs886040008 rs876660282 rs80357526 rs80357105 rs80357739 rs730881459 rs756748588 rs80357444 rs80357121 rs80357425 rs397508925 rs568312345 rs397508921 rs55678461 rs80357940 rs587776482 rs143920945 rs397508926 rs80357786 rs786203965 rs886037999 rs886039989 rs876659852 rs863224510 rs786204049 rs786203720 rs879254165 rs730881479 rs397508931 rs16940 rs730881478 rs398122653 rs80357885 rs80357733 rs397508948 rs41286296 rs80357982 rs80357650 rs886040010 rs786202103 rs562370358 rs80357516 rs80357654 rs80357546 rs876658590 rs80357557 rs886037994 rs397508965 rs886039983 rs80357147 rs200521980 rs28897680 rs886039987 rs80357554 rs80357922 rs587782843 rs886039980 rs397508945 rs730881482 rs273898674 rs886039996 rs55914168 rs886040006 rs876660889 rs397508964 rs431825390 rs397508928 rs876660305 rs80357595 rs80357583 rs80357932 rs80356895 rs273898678 rs80357851 rs397508935 rs886040024 rs786203455 rs80357814 rs55932871 rs80356869 rs397508942 rs397508960 rs483353086 rs876660543 rs886037997 rs483353087 rs886040031 rs80356902 rs397508952 rs886039975 rs80357539 rs786202684 rs587782595 rs80357060 rs80357399 rs886040018 rs886040015 rs776542749 rs864622536 rs80357364 rs397508916 rs786202015 rs587781448 rs757933953 rs864622452 rs878854937 rs397507198 rs1800064 rs779227326 rs768904580 rs730881481 rs886039991 rs80357725 rs80356999 rs771890863 rs886040029 rs397508944 rs876659959 rs876659175 rs975724885 rs80357909 rs80357391 rs747046197 rs80357755 rs886039986 rs80357082 rs397508956 rs886040019 rs730881480 rs886040022 rs587778116 rs80356983 rs397508959 rs886039977 rs80357335 rs80356838 rs886037995 rs587781781 rs41286298 rs876660266 rs587782027 rs397507196 rs80357681 rs62625305 rs876658306 rs397508920 rs4986850 rs786204264 rs869320788 rs863224841 rs749896277 rs397507195 rs886039984 rs786201649 rs748550848 rs876660463 rs397508937 rs878854939 rs730881483 rs80357203 rs779748579 rs372366481 rs886040011 rs80357933 rs80357233 rs80357267 rs80357193 rs397508958 rs80357507 rs397508930 rs80357957 rs398122656 rs886039997 rs398122657 rs4986846 rs80357238 rs56039126 rs80357960 rs80357688 rs886040027 rs80357085 rs886040014 rs886039993 rs397508946 rs80357166 rs80357820 rs80357638 rs80357063 rs922908090 rs886040033 rs80357566 rs886040002 rs80357880 rs786204220 rs80357643 rs876660823 rs7502059 rs273898679 rs886040000 rs886040003 rs786201944 rs80357780 rs397508933 rs730881474 rs431825388 rs397507194 rs4986845 rs80356945 rs80357695 rs786203435 rs80357522 rs398122655 rs397508950 rs759655692 rs80356834 rs80357574 rs397508934 rs28897681 rs397508929 rs886039982 rs730881475 rs80357999 rs80357495 rs762772420 rs397508923 rs397508961 rs80357114 rs80356950 rs755706172 rs769044421 rs28897679 rs1799949 rs273898677 rs886040009 rs80357860 rs398122646 rs886037998 rs201875054 rs397508949 rs80357768 rs886040028 rs786201460 rs80356875 rs753521391 rs397508955 rs886040025 rs886039994 rs80357005 rs886040023 rs778215185 rs886040020 rs80357668 rs397508915 rs80357521 rs80356948 rs397508922 rs397508941 rs273898676 rs80357944 rs397508947 rs770002293 rs369373293 rs876659136 rs80357715 rs80357194 rs4986844 rs886040016 rs876660267 rs786202757 rs587782739 rs886039976 rs774730386 rs886037993 rs397508932 rs80357793 rs886039981 rs397508919 rs398122647 rs886039988 rs730881476 rs80357058 rs587776481 rs80357441 rs273898681 rs80357802 rs397507199 rs80356912 rs876660112 rs80356835 rs397508936 rs80356884 rs80357850 rs767530204 rs273898680 rs876660335 rs398122650 rs886040007 rs760864137 rs80357129 rs397508953 rs876660781 rs886037996 rs397508951 rs764009120 rs80357773 rs751104940 rs878854935 rs886039998 rs397508962 rs876658733 rs398122658 rs561988641 rs756729124 rs886039985 rs572835027 rs772617029 rs80357913 rs876660188 rs876658791 rs886040021 rs397508939 rs886039979 rs80357871 rs876658307 rs786203594 rs80357355 rs750594744 rs80357192 rs876660005 rs431825389 rs879255480 rs878853289 rs80357056 rs80357182 rs80357930 rs80357415 rs80357250 rs886040005 rs398122649 rs587781684 rs777404687 rs775424259 rs771519405 rs760810832 rs80357051 rs80357602 rs80357936 rs876658606 rs786201429 rs886039995 rs56329598 rs886039992 rs876659447 rs62625306 rs398122654 rs80357853 rs80357467 rs80357626 rs80357449 rs80356907 rs80357657 rs397508954 rs886040026 rs886040001 rs886040004 rs80357990 rs769088801 rs80356889 rs80357029 rs545736576 rs886039999 rs397508963 rs80359886 rs80357515 rs80357567 rs372017932 rs80357753 rs730881477 rs587781420 rs886040012 rs80357344 rs273898682 rs587782709 rs606231389 rs397507197 rs886040017 rs397508918 rs769948300 rs397508943 rs876660920 rs397508924 rs80357494 rs80357426 rs80357381 rs876660144 rs397508927 rs773413634 rs878854938 rs80357298 rs80357771

Submission count

NA

Allele Nomenclature



Chromosome Location

Chr.17: 43093653-43093653 on Build GRCh38

Allele Frequency



1000Genome Applied Biosystems® HapMap
Global - Not Available Caucasian - Not Available CEPH (CEU) - Not Available
EAS - Not Available African American - Not Available YRI (Yoruba) - Not Available
SAS - Not Available Chinese - Not Available CHB (Han Chinese) - Not Available
AFR - Not Available Japanese - Not Available JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available


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More Information


Set Membership:

 Between 400-700 bp

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)

Format:

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer™ Tool Quick Reference




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