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See other KRTAP10-3 CNV Assays ›
Gene Symbol
KRTAP10-3
Assay Reference Genome
Location

Chr.21:44558028 on build GRCh38
Cytoband
21q22.3
Assay ID Hs00149817_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Genomic Map

Build 38.2 Human Chr.21: Hs00149817_cn
Created with Raphaël 2.1.2TSPEARKRTAP10-3TSPEARKRTAP10-344,544,00044,545,00044,546,00044,547,00044,548,00044,549,00044,550,00044,551,00044,552,00044,553,00044,554,00044,555,00044,556,00044,557,00044,558,00044,559,00044,560,00044,561,00044,562,00044,563,00044,564,00044,565,00044,566,00044,567,00044,568,00044,569,00044,570,00044,571,00044,572,00044,573,000
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Assay Details

Target Gene Details

Entrez Gene ID:

 386682

Gene Name:

 keratin associated protein 10-3

Gene Aliases:

 KAP10.3, KAP18-3, KAP18.3, KRTAP10.3, KRTAP18-3, KRTAP18.3

Location:

 Chr.21:44558023-44558760 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KRTAP10-3 NM_198696.2 NP_941969.2
AB076350.1 BAD01537.1
AJ566383.1 1 192 CAD97463.1
BC133677.1

Target Gene Details

Entrez Gene ID:

 54084

Gene Name:

 thrombospondin type laminin G domain and EAR repeats

Gene Aliases:

 C21orf29, DFNB98, TSP-EAR

Location:

 Chr.21:44497892-44711580 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSPEAR NM_001272037.1 NP_001258966.1
NM_144991.2 NP_659428.2
AJ487962.1 CAD32309.1
BC021197.2 AAH21197.2
BC115415.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv587803 Chr.21:44514317 - 44569605 on Build GRCh38 Loss KRTAP10-2 TSPEAR-AS2 TSPEAR-AS1 TSPEAR KRTAP10-3 KRTAP10-1
esv3647132 Chr.21:44539529 - 44591271 on Build GRCh38 Gain KRTAP10-2 KRTAP10-6 KRTAP10-4 TSPEAR KRTAP10-5 KRTAP10-3 KRTAP10-1
esv2723638 Chr.21:44249174 - 44593709 on Build GRCh38 Deletion LRRC3-AS1 LOC100505727 TSPEAR-AS2 LRRC3 C21orf2 DNMT3L PFKL KRTAP10-2 LOC105372833 TSPEAR-AS1 KRTAP10-6 KRTAP10-4 TSPEAR KRTAP10-5 KRTAP10-3 TRPM2 TRPM2-AS KRTAP10-1 AIRE
nsv1055163 Chr.21:44475780 - 44646211 on Build GRCh38 Gain LOC100505727 KRTAP10-7 TSPEAR-AS2 KRTAP10-8 KRTAP10-9 KRTAP10-2 KRTAP10-10 TSPEAR-AS1 KRTAP10-6 KRTAP10-4 TSPEAR KRTAP10-5 KRTAP10-3 KRTAP10-1
esv33817 Chr.21:43749531 - 44647625 on Build GRCh38 Loss LRRC3-AS1 KRTAP10-7 TSPEAR-AS2 CSTB ICOSLG C21orf2 KRTAP10-11 DNMT3L PFKL KRTAP10-2 TRAPPC10 KRTAP10-10 LOC105372833 KRTAP10-6 TSPEAR TRPM2 AIRE LOC100505727 PDXK AGPAT3 KRTAP10-8 KRTAP10-9 LRRC3 RRP1 TSPEAR-AS1 KRTAP10-4 C21orf33 KRTAP10-5 KRTAP10-3 PWP2 AATBC TRPM2-AS KRTAP10-1
dgv4435n100 Chr.21:44527151 - 44595409 on Build GRCh38 Gain KRTAP10-2 KRTAP10-6 KRTAP10-4 TSPEAR KRTAP10-5 KRTAP10-3 KRTAP10-1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

intercellular signal molecule

Gene Ontology Categories:

Function(s) Process(es)


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