System Message

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Gene Symbol:
SOX11
Entrez Gene ID
6664
Gene Name:
SRY-box 11
Gene Aliases
MRD27
Gene Chromosome Location
Chr.2: on Build GRCh38
UniGene
Hs.432638
Species:
Human
Primer Chromosome Location
Chr.2: 5693513-5693687 on Build GRCh38
Amplicon Length
175
Primer Sequences
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Ampliseq ID's
Primer ID Hs00527783_CE
Primer 5'-tail Option
Purification
Primer Pair /FWD/REV
Synthesis Scale 25 nmol
Availability Made To Order
Catalog #'s A15629,A15630
Price (USD) USD 16.46,USD 16.46

Genomic Map

Build 38.2 Human Chr.2: Hs00527783_CE
Created with Raphaël 2.1.2LINC01248SOX11NR_110580.1NM_003108.3DB455249.1BX111928.1U23752.1ENST00000322002.0BM680083.15,659,0005,660,0005,661,0005,662,0005,663,0005,664,0005,665,0005,666,0005,667,0005,668,0005,669,0005,670,0005,671,0005,672,0005,673,0005,674,0005,675,0005,676,0005,677,0005,678,0005,679,0005,680,0005,681,0005,682,0005,683,0005,684,0005,685,0005,686,0005,687,0005,688,0005,689,0005,690,0005,691,0005,692,0005,693,0005,694,0005,695,0005,696,0005,697,0005,698,0005,699,0005,700,0005,701,0005,702,0005,703,0005,704,0005,705,0005,706,0005,707,0005,708,0005,709,0005,710,0005,711,0005,712,0005,713,0005,714,0005,715,0005,716,0005,717,0005,718,0005,719,0005,720,0005,721,0005,722,0005,723,0005,724,0005,725,0005,726,0005,727,0005,728,0005,729,0005,730,0005,731,0005,732,0005,733,0005,734,0005,735,000
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Assay Details

Gene Information


SOX11
Accession Protein COSMIC ID Mutation AA
RefSeq NM_003108.3 NP_003099.1 7194841 c.900C>A p.G300G
5644220 c.883G>A p.D295N
5643029 c.885C>T p.D295D
5649355 c.801G>C p.L267L
5644554 c.831C>T p.A277A
4628086 c.818C>T p.A273V
5947988 c.792G>A p.S264S
7391457 c.814G>A p.V272I
4957248 c.833G>A p.S278N
5034479 c.865G>A p.E289K
5058972 c.886G>A p.E296K
6787409 c.909G>T p.S303S
6787408 c.816C>T p.V272V
4729139 c.961C>A p.Q321K
4729138 c.925A>G p.S309G
4428551 c.950A>G p.N317S
6542321 c.860C>T p.S287F
4422508 c.893G>A p.R298Q
1266484 c.879C>A p.L293L
3582375 c.903G>A p.A301A
6576421 c.886G>C p.E296Q
4820389 c.801G>A p.L267L
1266483 c.873G>T p.A291A
4773929 c.879_880insC p.Y294fs*104
7391454 c.893G>T p.R298L
GenBank AB028641.1 BAA88122.1 - - -
ENST00000322002.0 - - -
U23752.1 AAB08518.1 - - -


Phenotype

MIM: 600898

Literature Links:

SOX11 PubMed Links

SNP ID

rs766602101 rs750205888 rs767752007 rs746589681 rs760713336 rs770303432 rs775602980 rs754688424 rs765121971 rs759699166 rs773585054 rs780798415 rs763266934 rs943565885 rs752790790 rs757172490 rs779845221 rs765203965 rs767520966 rs771353105 rs773641572 rs774704629 rs758181885 rs762529785 rs971298974 rs751838063

Submission count

NA

Allele Nomenclature



Chromosome Location

Chr.2: 5693561-5693561 on Build GRCh38

Allele Frequency



1000Genome Applied Biosystems® HapMap
Global - Not Available Caucasian - Not Available CEPH (CEU) - Not Available
EAS - Not Available African American - Not Available YRI (Yoruba) - Not Available
SAS - Not Available Chinese - Not Available CHB (Han Chinese) - Not Available
AFR - Not Available Japanese - Not Available JPT (Japanese) - Not Available
EUR - Not Available
AMR - Not Available


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More Information


Set Membership:

 Less than 200 bp

Panther Classification:

Molecular Function -

HMG box transcription factor

Gene Ontology Categories:

Function(s) Process(es)

Format:

Each primer will be delivered in a single tube, dried-down

Quick Reference Guide

Primer Designer™ Tool Quick Reference




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