Techniques for electron microscopy sample preparation

Whether you’re milling, cutting, or polishing, Thermo Scientific instruments support a range of sample types and preparation techniques to help you ensure accurate, reliable results.


Preparing large 2D areas on the surface of electron microscopy samples with the CleanMill Broad Ion Beam System

High-quality material observation and characterization requires an artifact-free surface, which can be difficult to achieve with traditional polishing techniques like grinding or mechanical polishing. The Thermo Scientific CleanMill Broad Ion Beam System offers a comprehensive ion polishing solution for SEM applications in materials science. It enables pristine surface preparation, particularly for sensitive materials. 

 

The CleanMill System, designed as a cross-polisher (BIB-CP), addresses applications where sample preparation is as crucial as the result. It comes standard with an ultra-high-energy argon ion source (with a maximum accelerating voltage of 16 kV) for efficient ion milling without compromising surface quality. When ultra-fine surface polishing is needed, the CleanMill System can be configured with an ultra-low-energy ion source to achieve the finest surface finish.

Li-NMC cathode before (A) and after (B) broad ion beam cross-polishing Li-NMC cathode before (A) and after (B) broad ion beam cross-polishing

Broad ion beam milling

Broad ion beam milling is used to polish sample surfaces and cross-sections before SEM imaging and characterization. The CleanMill System uses a complete ion beam polishing solution for SEM applications in materials science, enabling optimal imaging and analysis of materials that require a pristine surface, including beam- and air-sensitive materials.

 

Key features:

  • Broad ion beam milling and polishing
  • Wide acceleration voltage range
  • Cryogenic sample preparation
  • CleanConnect (IGST) compatible
Broad ion beam milling Broad ion beam milling

Preparing large 2D areas on the surface of electron microscopy samples with the Spin Mill technique

Sample surface quality is a critical consideration in numerous SEM and FIB techniques. High-resolution SEM imaging and EBSD analyses, for instance, demand exceptionally clean, artifact-free surfaces. Traditional methods like mechanical polishing are time-consuming and often fall short in ensuring the necessary sample quality. Additionally, locating specific features on the sample surface for lamella preparation or 3D data collection can be challenging, especially after exposure to air or when removing thin coating layers to access the desired structure.

 

The Spin Mill technique offers a valuable solution by utilizing the extended negative tilt range of Thermo Scientific PFIBs and Hydra DualBeam FIB-SEMs. It exposes the sample surface to the ion beam at a glancing angle while rotating the stage, effectively polishing surfaces up to 1 mm in diameter. Spin Mill is fully automated and integrated with the Thermo Scientific Auto Slice & View 5 Software package, providing a quick and efficient method for preparing large-area surfaces of the highest quality, even at low FIB voltages.

Ti alloy sample polished using the Spin Mill technique Ti alloy sample polished using the Spin Mill technique

FIB-SEM cross-section sample preparation

A basic application of FIB-SEM instruments is creating cross sections, a fundamental application providing insights into materials' microstructure. By selectively removing material with a FIB, hidden structures beneath the sample surface can be examined with SEM or EDS, revealing details about structural properties, composition, and failure mechanisms. 

 

Key factors for achieving high-quality cross-section preparation include the FIB column's ability to efficiently focus ions for fast and clean cuts. Complex or non-uniform samples may pose challenges, but the "rocking mill" technique, a software feature in all Thermo Scientific DualBeam FIB-SEMs, can aid in producing smooth surfaces without the need for additional hardware. Furthermore, fully automated preparation of numerous cross sections is a standard feature in Thermo Scientific AutoTEM 5 Software, streamlining operator and tool efficiency.

FIB-SEM cross-section sample preparation

Sample preparation for scanning transmission electron microscopy

Sample preparation for (scanning) transmission electron microscopy ((S)TEM) is a critical task in materials characterization labs. FIB-SEM is the primary method for creating site-specific, artifact-free samples of controlled thickness and is widely employed in research.

 

Sample quality significantly impacts (S)TEM results, prompting researchers to invest time and effort in mastering preparation techniques. Key requirements for a good (S)TEM sample include achieving the appropriate thickness (typically 10nm to 100nm), maintaining sample cleanliness and structural integrity, and ensuring the presence of features of interest. Often, this requires preparation of planar samples that are parallel to the sample surface, or inverted lamellae.

Sample preparation for scanning transmission electron microscopy

Thermo Scientific DualBeam FIB-SEMs have been at the forefront of (S)TEM sample preparation for three decades. Their combination of groundbreaking technologies, user friendliness, and automation empowers both experts and novices to effortlessly create high-quality samples, leading to reliable (S)TEM data. Thermo Fisher Scientific offers a complete portfolio of FIB-SEM systems for preparing challenging samples, complemented by AutoTEM Software for fully automated TEM lamella preparation in various geometries.

Atom probe tomography sample preparation with focused ion beam milling

Atom probe tomography (APT) achieves atomic-resolution 3D compositional analysis by ejecting surface atoms as ions and analyzing their identity using a mass spectrometer. Focused ion beam (FIB) milling in DualBeam FIB-SEMs is essential for precise, high-quality, site-specific sample preparation for APT characterization. DualBeam FIB-SEMs make it possible to create sharp tips of the shape required for ion ejection, while monitoring the process in real time using SEM. The fundamental criteria for a good APT sample are:

 

  • Site-specific sample preparation capability
  • Needle-shaped specimen with tip radius typically less than 50 nm
  • Uniform, circular cross section of the tip to produce a radially symmetric electric field
  • Correct taper angle for significant evaporation events to occur
  • Minimal damage introduced to the tip during specimen preparation (apex region of needle should represent original sample in terms of microstructure and composition)
APT sample rough milling and lift-out with a plasma focused ion beam (PFIB).  (a-b) are SEM images of the sample rough milled by a 2.5 µA FIB with free J-cut completed on one side and bottom. Images (c-f) are FIB images of the lift-out process, with one lift for multiple APT samples. APT sample rough milling and lift-out with a plasma focused ion beam (PFIB). (a-b) are SEM images of the sample rough milled by a 2.5 µA FIB with free J-cut completed on one side and bottom. Images (c-f) are FIB images of the lift-out process, with one lift for multiple APT samples.

Thermo Scientific DualBeam FIB-SEMs, such as the Helios 5, Helios 5 PFIB and Helios Hydra DualBeam FIB-SEMs, allow top-notch APT sample preparation. Gallium FIB provides the best FIB resolution for ultimate control of the sample shape, while Xe plasma is essential for preparing samples sensitive to Ga. Finally, the Helios Hydra DualBeam FIB-SEM makes use of different plasma ion species (oxygen, argon, nitrogen, or xenon) in the same instrument, optimizing milling for the most challenging samples. Additionally, Thermo Scientific AutoScript Software allows you to automate the final thinning step of the process, alleviating the need for repetitive sample preparation tasks.

High-quality APT steel sample prepared with a DualBeam FIB-SEM for characterization of grain boundary carbides. High-quality APT steel sample prepared with a DualBeam FIB-SEM for characterization of grain boundary carbides

For Research Use Only. Not for use in diagnostic procedures.