![Analysis of X-ray CT Calibration Spheres using the Metrology Workroom](/software-em-3d-vis/xtra-library/uploads/2020/11/image-copy-md.jpg)
Analysis of X-ray CT Calibration Spheres using the Metrology Workroom
Demo, Data, Misc
4 Jan 2021 - This video presents how to use the Metrology workroom to analyze calibration spheres used in X-ray Computed Tomography. Learn more
![Thresholding From Mean](/software-em-3d-vis/xtra-library/uploads/2020/12/thresholdingFromMean-2-md.png)
Python (pyscro), Data
4 Jan 2021 - This module performs an adaptive global thresholding of the input image by computing a deviation from the mean of its grayscale values. Learn more
![How to Create and Animate a Camera Path](/software-em-3d-vis/xtra-library/uploads/2021/03/path-md.jpg)
How to Create and Animate a Camera Path
Demo
3 Jan 2021 - This tutorial explains how to create a camera path, and then animate the camera along this path with the Animation Director. Learn more
![How to Animate the Appearance of Objects with the Animation Director](/software-em-3d-vis/xtra-library/uploads/2021/03/AD-md.jpg)
How to Animate the Appearance of Objects with the Animation Director
Demo
3 Jan 2021 - This tutorial explains how to animate the appearance and disappearance of objects with the Animation Director. Learn more
![How to Get Started with the Animation Director](/software-em-3d-vis/xtra-library/uploads/2021/03/GStAD-md.jpg)
How to Get Started with the Animation Director
Demo
3 Jan 2021 - This tutorial demonstrates the basic techniques of animation creation with the Animation Director. Learn more
Tcl
17 Nov 2020 - This module creates a spreadsheet that contains the measurement and annotation data (generated with the Measurement tool) that can be used for further analysis. Learn more
![Marker Based Watershed Recipe](/software-em-3d-vis/xtra-library/uploads/2020/10/snapshot-md.png)
Recipe ISP, IVP, A2D
17 Nov 2020 - A recipe for applying a Marker Based Watershed (as in the Segmentation Editor) from the Project View. Learn more
![Automatic Extraction of Transparent Surface Cross Section](/software-em-3d-vis/xtra-library/uploads/2020/10/Xtra-extractXsection-md.png)
Automatic Extraction of Transparent Surface Cross Section
Python (pyscro), Project (hx, pgo)
20 Oct 2020 - A module for creating partially transparent capping surfaces. Learn more
Auto Threshold for Multi-Thresholding
Tcl
19 Oct 2020 - The combination of Auto Thresholding and Multi-Thresholding makes it easy to create precise surfaces without additional smoothing, using the Generate Surface's smoothing option "Existing Weights". Learn more
![Volume Projection](/software-em-3d-vis/xtra-library/uploads/2020/09/snapshotVolumeProjection-md.png)
Python (pyscro)
19 Oct 2020 - This Xtra creates a volume projection along any orthogonal axis using arithmetic operations. Learn more
![Relative Area Fraction for Amira-Avizo2D](/software-em-3d-vis/xtra-library/uploads/2020/10/HowTo_RelativeAreaFraction-md.jpg)
Relative Area Fraction for Amira-Avizo2D
Recipe ISP, IVP, A2D, Python (pyscro), Data, Misc
5 Oct 2020 - This Xtra provides a module to help compute the area fraction of a label over the area of another label in Amira-Avizo2D. Learn more
![AMIRA_LOCAL Setup Tutorial](/software-em-3d-vis/xtra-library/uploads/2020/09/Clipboard02-md.jpg)
Demo
5 Oct 2020 - This Xtra provides a brief video that explains how to set up an AMIRA_LOCAL path on Windows 10. Learn more
![Explode Surface Animation Script](/software-em-3d-vis/xtra-library/uploads/2020/07/ExplodeSurface2-md.png)
Explode Surface Animation Script
Tcl
5 Oct 2020 - A script that will animate the expansion of pieces of a surface. Contains the script, documentation, an example surface, and a video of the finished result. Learn more
![Apply a Recipe on a Batch of Files](/software-em-3d-vis/xtra-library/uploads/2022/03/3-8-2022 10-39-58 AM-md.jpg)
Apply a Recipe on a Batch of Files
Recipe (hxrecipe), Tcl
25 Aug 2020 - Apply a recipe to a batch of files and save the results in an output directory. Learn more
![Selective Border Kill](/software-em-3d-vis/xtra-library/uploads/2020/07/snapshot_selectiveborderkill-md.jpg)
Tcl
24 Aug 2020 - A module that allows you to filter particles selectively, based on their contact with each border of the image. Learn more
![Segmentation of agglomerated Ni nanoparticles](/software-em-3d-vis/xtra-library/uploads/2019/10/size-distribution-Ni-md.jpg)
Segmentation of agglomerated Ni nanoparticles
Recipe ISP, IVP, A2D
24 Aug 2020 - This recipe segments overlapping Ni nanoparticles on a high resolution STEM image. A size distribution of the nanoparticles can also be computed. Learn more
![Hough Circle Fitting](/software-em-3d-vis/xtra-library/uploads/2023/03/hough circle fitting xtra-md.png)
Python (pyscro)
30 Jul 2020 - This module uses a Generalized Hough-transform to detect circles in an image. Learn more
![Multi-Scale Cylinder Correlation](/software-em-3d-vis/xtra-library/uploads/2020/04/MultiScaleCylinderCorrelation-md.png)
Multi-Scale Cylinder Correlation
Python (pyscro), Project (hx, pgo)
30 Jul 2020 - This module gives better results for fiber-tracing in the case of multiple fibers with differing or varying diameters in the same dataset. Learn more
![Create a Porosity Analysis Recipe](/software-em-3d-vis/xtra-library/uploads/2020/07/15-07-2020 10-18-04-md.jpg)
Create a Porosity Analysis Recipe
Recipe (hxrecipe), Demo
15 Jul 2020 - This tutorial explains how to create a simple porosity analysis and turn it into a push-button recipe. Learn more
![Segment TEM data without artifact and background effect](/software-em-3d-vis/xtra-library/uploads/2020/07/Xtra_TEM-md.png)
Segment TEM data without artifact and background effect
Recipe (hxrecipe), Tcl, Project (hx, pgo)
10 Jul 2020 - Segment TEM data aided by the Structure enhancement filter. Learn more
![Extracting and Visualizing Local Statistics from Fibrous Materials](/software-em-3d-vis/xtra-library/uploads/2020/04/snapshot-md.jpg)
Extracting and Visualizing Local Statistics from Fibrous Materials
Project (hx, pgo)
3 Jul 2020 - This XTRA entry discusses the application of the “Spatial Graph Local Statistics” to extract statistical information from traced fibers in a fibrous material. The sample is 50% glass fiber-reinforced polymer (GFRP), courtesy of EMS Grivory. Learn more