Brighter insights, precise research

Tell your cell story with Invitrogen antibody labeling kits

In addition to exceptional brightness and photostability, our customers can get access to an experienced, problem-solving technical support team, application and experimental tips, and protocols to help with experimental planning.

Not sure which type of conjugation kit to use? Explore the table and sections below to find the right antibody conjugation kit for your application.

Which antibody labeling kit do you need?

These kits have quick protocols and conjugates that are ready in 15 minutes or less.

 Zip Rapid Antibody Labeling KitsZenon Antibody Labeling Kits
Amount IgG labeled/reaction*100 µg1–20 µg
Label target/methodFree lysines/covalent amine-reactive chemistryFc portion of IgG/antibody affinity
Can measure degree of labeling?NoNo
Can store conjugate more than 24 hr?YesNo
Site-specific label?NoNo
Compatible with BSA or other stabilizers in sample buffer?NoYes
Requires post-label purification?NoNo
Time required for protocol15 min5 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

These kits use conventional amine-reactive dyes that covalently label primary amines on an antibody.

 Alexa Fluor Antibody Labeling KitsZip Rapid Antibody Labeling KitsLarge-scale antibody labeling kitsReadyLabel Antibody Labeling Kits
Amount IgG labeled/reaction*100 µg100 µg1 mg20 or 100 µg
Label target/methodFree lysines/covalent amine-reactive chemistry
Can measure degree of labeling?YesNoYesYes
Can store conjugate more than 24 hr?YesYesYesYes
Site-specific label?NoNoNoNo
Compatible with BSA or other stabilizers in sample buffer?NoNoNoYes
Requires post-label purification?Yes - includedNoYes - includedYes - included
Time required for protocol30 min15 min60 min60 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCAFC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

These methods prevent labeling of the antigen binding site.

 SiteClick Antibody Labeling Kits
Amount IgG labeled/reaction*100 µg–5 mg
Label target/methodCarbohydrates on IgG heavy chain/covalent, copper-free click chemistry
Can measure degree of labeling?Yes
Can store conjugate more than 24 hr?Yes
Site-specific label?Yes
Compatible with BSA or other stabilizers in sample buffer?Yes
Requires post-label purification?Yes - included
Time required for protocolovernight incubation
Optimal applications**FC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

Antibody labeling kits to rapidly screen for the binding of therapeutic antibodies

 Zenon Antibody Labeling KitsReadyLabel Antibody Labeling Kits
Amount IgG labeled/reaction*1–20 µg (96 labelings) 20 or 100 µg (5 labelings) 
Label target/methodFc portion of IgG/antibody affinityFree lysines/covalent amine-reactive chemistry
Can measure degree of labeling?NoYes
Can store conjugate more than 24 hr?NoYes
Site-specific label?NoNo
Compatible with BSA or other stabilizers in sample buffer?YesYes
Requires post-label purification?NoYes—included
Time required for protocol5 min60 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

pHrodo dyes are nonfluorescent at neutral pH and become brightly fluorescent in the acidic environment as they are internalized.

 pHrodo Antibody Labeling Kits SiteClick pHrodo Antibody Labeling Kits Zenon pHrodo Antibody Labeling Reagents
Amount IgG labeled/reaction*20 µg–1 mg100 µg–5 mg1–20 µg
Label target/methodFree lysines/covalent amine-reactive chemistryFc portion of IgG/antibody affinityFc portion of IgG/antibody affinity
Can measure degree of labeling?YesYesNo
Can store conjugate more than 24 hr?YesYesNo
Site-specific label?NoYesNo
Compatible with BSA or other stabilizers in sample buffer?NoYesYes
Requires post-label purification?Yes—includedYes—includedNo
Time required for protocol60 minOvernight incubation5 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

These kits have quick protocols and conjugates that are ready in 15 minutes or less.

 Zip Rapid Antibody Labeling KitsZenon Antibody Labeling Kits
Amount IgG labeled/reaction*100 µg1–20 µg
Label target/methodFree lysines/covalent amine-reactive chemistryFc portion of IgG/antibody affinity
Can measure degree of labeling?NoNo
Can store conjugate more than 24 hr?YesNo
Site-specific label?NoNo
Compatible with BSA or other stabilizers in sample buffer?NoYes
Requires post-label purification?NoNo
Time required for protocol15 min5 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

These kits use conventional amine-reactive dyes that covalently label primary amines on an antibody.

 Alexa Fluor Antibody Labeling KitsZip Rapid Antibody Labeling KitsLarge-scale antibody labeling kitsReadyLabel Antibody Labeling Kits
Amount IgG labeled/reaction*100 µg100 µg1 mg20 or 100 µg
Label target/methodFree lysines/covalent amine-reactive chemistry
Can measure degree of labeling?YesNoYesYes
Can store conjugate more than 24 hr?YesYesYesYes
Site-specific label?NoNoNoNo
Compatible with BSA or other stabilizers in sample buffer?NoNoNoYes
Requires post-label purification?Yes - includedNoYes - includedYes - included
Time required for protocol30 min15 min60 min60 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCAFC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

These methods prevent labeling of the antigen binding site.

 SiteClick Antibody Labeling Kits
Amount IgG labeled/reaction*100 µg–5 mg
Label target/methodCarbohydrates on IgG heavy chain/covalent, copper-free click chemistry
Can measure degree of labeling?Yes
Can store conjugate more than 24 hr?Yes
Site-specific label?Yes
Compatible with BSA or other stabilizers in sample buffer?Yes
Requires post-label purification?Yes - included
Time required for protocolovernight incubation
Optimal applications**FC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

Antibody labeling kits to rapidly screen for the binding of therapeutic antibodies

 Zenon Antibody Labeling KitsReadyLabel Antibody Labeling Kits
Amount IgG labeled/reaction*1–20 µg (96 labelings) 20 or 100 µg (5 labelings) 
Label target/methodFc portion of IgG/antibody affinityFree lysines/covalent amine-reactive chemistry
Can measure degree of labeling?NoYes
Can store conjugate more than 24 hr?NoYes
Site-specific label?NoNo
Compatible with BSA or other stabilizers in sample buffer?YesYes
Requires post-label purification?NoYes—included
Time required for protocol5 min60 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis

pHrodo dyes are nonfluorescent at neutral pH and become brightly fluorescent in the acidic environment as they are internalized.

 pHrodo Antibody Labeling Kits SiteClick pHrodo Antibody Labeling Kits Zenon pHrodo Antibody Labeling Reagents
Amount IgG labeled/reaction*20 µg–1 mg100 µg–5 mg1–20 µg
Label target/methodFree lysines/covalent amine-reactive chemistryFc portion of IgG/antibody affinityFc portion of IgG/antibody affinity
Can measure degree of labeling?YesYesNo
Can store conjugate more than 24 hr?YesYesNo
Site-specific label?NoYesNo
Compatible with BSA or other stabilizers in sample buffer?NoYesYes
Requires post-label purification?Yes—includedYes—includedNo
Time required for protocol60 minOvernight incubation5 min
Optimal applications**FC, IF, WB, HCAFC, IF, WB, HCAFC, IF, WB, HCA
*Kits are optimized for whole IgG protein, molecular weight 150 kDa unless otherwise indicated. For those kits, please see instructions on how to adjust protein concentration for optimal dye:protein ratios.
**FC=flow cytometry; IF=immunofluorescence; WB=western blot analysis; HCA=high content analysis
 
 

Not looking for a kit or need a different dye?

For flow cytometry antibody conjugation, see the NovaFluor Dyes for Immunophenotyping which are designed for more resolution with narrow emission spectra and minimal cross-laser excitation.

Find DyLight antibody labeling kits for labeling 1 mg or 100 μg of antibody with DyLight fluorophores across the spectrum.

Find standalone amine-reactive dyes and more information about amine-reactive chemistries in Fluorophores and Their Amine-Reactive Derivatives—Chapter 1, The Molecular Probes Handbook.

We also have thiol-reactive dyes available as standalone reagents and you can learn more about these in the Thiol-Reactive Probes—Chapter 2, The Molecular Probes Handbook.

Amine-reactive antibody labeling kits

Zip Rapid Antibody Labeling Kits

Zip Rapid Antibody Labeling Kits

Zip Alexa Fluor Rapid Antibody Labeling Kits allow you to efficiently label your precious antibody with fluorescent dyes to create an antibody conjugate that is ready to use within 15 minutes.

  • Label 100 μg of IgG antibody
  • Three labeling reactions per kit
  • Very fast and easy to use
  • 100% antibody recovery—no purification steps
  • No chemistry or conjugation experience needed

The kit contains everything you need to perform three separate labeling reactions. Covalently labeled conjugates are exceptional for multiple applications, including flow cytometry, fluorescence microscopy, immunohistochemistry, primary antibody detection, ELISAs, immunocytochemistry, and indirect FISH. Simply add 1 mL water to component A containing Zip buffer, add 1 mg of antibody, incubate for 15 minutes, and your antibody is ready to use (Figure 1).

Zip Rapid Antibody Labeling Kits selection guide

LabelEx/Em*Cat. No.
Alexa Fluor 488494/519Z11233
Alexa Fluor 555555/565Z11234
Alexa Fluor 647650/668Z11235

Ex/Em = Fluorescence excitation and emission maxima, in nm.

Find more information about Alexa Fluor dyes and other fluorophores in the Fluorophore Selection Guide

Ordering information for Zip Rapid Antibody Labeling Kits


Alexa Fluor Antibody Labeling Kits

Fluorescent microscopy

Invitrogen Alexa Fluor Antibody labeling kits are easy-to-use kits to covalently label primary antibodies with Alexa Fluor dyes. Each antibody labeling kit includes everything needed to perform up to three separate antibody conjugation reactions. The kits also now include pre-assembled and pre-filled spin columns to more easily and quickly purify out free dye from your sample.

  • Label 100 µg of antibody per reaction
  • Three labeling reactions per kit
  • Labeled antibodies ready in ~30 minutes
  • ~15 minutes actual hands-on time
  • Helps save time and minimize error with pre-assembled and pre-filled post-label purification columns
  • Requires removal of BSA and other protein stabilizers before conjugation

Alexa Fluor Antibody Labeling kits use amine-reactive chemistry to covalently attach Alexa Fluor dyes or a biotin molecule to your IgG antibody. For best results, ensure your primary antibody is in a compatible buffer, free of BSA or other protein stabilizers. If your antibody of interest needs clean-up, you can achieve this using antibody clean-up kits (Cat. No 89950, Cat No. 78609, or Cat No. 45206)

The first step in the conjugation workflow (Figure 2) is adding the included sodium bicarbonate to the primary antibody solution. This prepares the antibody for conjugation by enhancing the reactivity of the antibody's lysine residues.

The second step is to mix this solution with the included amine-reactive Alexa Fluor dye or biotin compound. The reactive groups on the fluorescent dye will attach to the primary amines on the IgG antibody's side chains. This creates a stable amide bond that covalently conjugates the fluorescent dye or biotin to the antibody. The conjugation reaction completes efficiently at room temperature after 15 minutes of incubation.

The final step is to remove the free or unbound dye which helps reduce background signal in your downstream applications. Each kit includes improved purification spin columns to help you achieve this. The pre-filled, pre-assembled columns are now compatible with standard microcentrifuges, helping save you time and lab space.

Figure 2. Overview of Alexa Fluor Antibody Labeling Kits process. Simply adjust the protein concentration to ~1 mg/mL in the provided buffer, then add it to a vial of amine-reactive dye. Purification is accomplished on the included Zeba Dye and Biotin removal columns optimized for ≥7 kDa proteins.

Antibody labeling kits selection guide

Ex/Em = Fluorescence excitation and emission maxima, in nm.

Find more information about Alexa Fluor dyes and other fluorophores in the Fluorophore Selection Guide

ReadyLabel Antibody Labeling Kits

EVOS M7000 imaged Human Colon Tissue fluorescently labeled with ReadyLabel Antibody Labeling kits

Invitrogen ReadyLabel Antibody Labeling Kits provide a 2-in-1 antibody labeling and purification kit, to label antibodies directly in presence of impurities like BSA and other protein stabilizers without compromising signal to background.

Our ReadyLabel dyes are now available in expanded dye formats optimized for spectral unmixing, to enable primary antibody detection for your multiplex or spatial biology experiments.

  • No antibody purification step needed
  • Label 20 μg or 100 μg of IgG antibody
  • 5 labeling reactions per kit
  • Labeled antibodies ready in 60 minutes
  • Single or multiplex staining
  • Improved signal to background

Watch the ReadyLabel protocol video

ReadyLabel Antibody Labeling Kits allow for fast, convenient antibody conjugation of off-the-shelf antibodies and cell culture supernatants without prior purification of the antibody solution. This works because the provided ReadyLabel spin columns contain resin that filter out contaminating stabilizer proteins present in the antibody solution (Figure 3). The resulting covalently bonded antibody conjugate can be used with flow cytometry, western blotting, ELISA, and indirect FISH.

ReadyLabel kits are equipped with your choice of our most popular stains to produce high yields of bright, soluble conjugates. Need a different dye? Consider our ReadyLabel Flex Kits, which contain everything needed except the dye, and use a dye of your choice. Our most popular ReadyLabel Kits (Alexa Fluor 488, Alexa Fluor 647, Biotin, and Flex) are available in two different pack sizes (20 μg or 100 μg IgG per reaction) and include all components necessary for five labeling reactions. Our ReadyLabel kits designed for high-plex staining or spatial biology workflows are available in the 20 μg pack size.

How ReadyLabel Kits work:  ReadyLabel resin-containing spin columns capture BSA and other stabilizing proteins and remove them from the antibody solution

Figure 3. Antibodies are often stored with BSA or other protein stabilizers to prevent degradation. ReadyLabel kits are equipped with resin-containing spin columns that capture these contaminants and allow you to skip the purification step of your antibody solution. With approximately 20 minutes of hands-on time, and 30 minutes of incubation at room temperature, your covalently bonded antibody conjugate is now ready to use.

How to: ReadyLabel Antibody Labeling Kits protocol

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    Ordering information for ReadyLabel Antibody Labeling Kits

    ReadyLabel Antibody Labeling Kits offer an exceptional advantage for multiplex or high-plex experiments. Unlike secondary detection methods, which are often constrained by the number of available IgG species, our kits allow you to directly conjugate your primary antibodies of your choice, filling gaps in your panels. This means you can achieve higher levels of multiplexing with greater flexibility.

    Designed with high-quality, bright dyes, optimized for spectral unmixing, and a focus on minimizing background noise through BSA removal, our kits enable clear and precise signals in your experiments. This clarity enhances the reliability and accuracy of your results, making ReadyLabel Antibody Labeling Kits well suited for multiplexing applications.

    Visit our spatial biology resource center to learn more

    Fluorescent microscopy image of colon tissue

    Figure 4. Imaged on the EVOS S1000 Spatial Imaging Instrument at 20x, FFPE human colon tissue was stained using ReadyLabel Kits. ReadyLabel Alexa Fluor 420 SMA, ReadyLabel Alexa Fluor 514 CD20, ReadyLabel Alexa Fluor Plus 555 PCNA, ReadyLabel Alexa Fluor 594 CD45RB, ReadyLabel Alexa Fluor 647 eCadherin, ReadyLabel Alexa Fluor 700 Cytokeratin, and ReadyLabel Alexa Fluor Plus 750 CD68.

     Fluorescent microscopy image of human brain tissue

    Figure 5. Imaged on the EVOS S1000 Spatial Imaging Instrument at 20x, FFPE Human brain tissue with Parkinson’s disease was stained using a mix of conjugated primary antibodies and ReadyLabel kits. DAPI, Alexa Fluor 420 CD68, Alexa Fluor 488 GFAP, Alexa Fluor Plus 555 Ki67, ReadyLabel Alexa Fluor 594 LRRK2, ReadyLabel Alexa Fluor 647 alpha Synuclein, Alexa Fluor 700 p53, and Alexa Fluor Plus 750 Vimentin. 

    Fluorescent microscopy image of human tonsil tissue

    Figure 6. Imaged on the EVOS S1000 Spatial Imaging Instrument at 20x, FFPE human tonsil tissue was stained using ReadyLabel Kits. ReadyLabel Alexa Fluor 420 SMA, ReadyLabel Alexa Fluor 514 CD20, ReadyLabel Alexa Fluor Plus 555 PCNA, ReadyLabel Alexa Fluor 594 CD45RB, ReadyLabel Alexa Fluor 647 eCadherin, ReadyLabel Alexa Fluor 700 Cytokeratin, and ReadyLabel Alexa Fluor Plus 750 CD68.

    Fluorescent microscopy image of colon tissue

    Figure 7. Imaged on the EVOS S1000 Spatial Imaging Instrument at 20x, FFPE human colon tissue was stained using ReadyLabel Kits. ReadyLabel Alexa Fluor 420 GranzymeB, ReadyLabel Alexa Fluor 514 Cytokeratin, ReadyLabel Alexa Fluor Plus 555 PCNA, ReadyLabel Alexa Fluor 594 HLA-DR, ReadyLabel Alexa Fluor 647 eCadherin, ReadyLabel Alexa Fluor 700 SMA, and ReadyLabel Alexa Fluor Plus 750 CD68.

    Large-scale antibody labeling kits

    Protein Labeling Kits

    Thermo Fisher Scientific large-scale antibody or protein labeling kits provide a nearly effortless way to covalently label 1 mg of IgG antibody with a fluorescent dye (including Alexa Fluor dyes) or biotin.

    • Label 1 mg antibody
    • Three labeling reactions in each kit
    • Removal of BSA and other stabilizers is required prior to labeling
    • Not compatible with amine-containing buffers (e.g., Tris)
    • Ready to use in 2 hours
    • ~ 30 minutes actual hands-on time

    The large-scale antibody or protein labeling kits utilize an amine-reactive fluorophore or hapten to covalently attach the label to the IgG antibody. Once formed, the covalent bond between the label and the protein is extremely stable—you are using the same chemistry we use to prepare our own primary and secondary conjugates.

    Simply add ~1 mg of purified IgG (in ~500 μL and free of amine-containing buffers such as Tris) to one of the vials containing a premeasured quantity of amine-reactive dye and a magnetic stir bar. Purification is accomplished by a pre-packed spin column supplied with the kit and affords high antibody recovery (typically >85%). The entire labeling and purification procedure can be completed in as little as 90 minutes (approximately 15 mins hands-on time). Removal of free dye is essential for the determination of the degree of labeling (DOL). Everything needed to perform three conjugations is provided.

    Figure 5. Overview of the large-scale antibody labeling kits process. Adjust the protein concentration to ~2 mg/mL, add provided bicarbonate, then add the solution to the vial of reactive dye. Purification is accomplished using a pre-packed spin column that is compatible with proteins ≥20 kDa.

    Large-scale antibody or protein labeling kits selection guide

    Ex/Em = Fluorescence excitation and emission maxima, in nm.

    Find more information about Alexa Fluor dyes and other fluorophores in the Fluorophore Selection Guide


    Affinity antibody labeling kits

    Zenon Antibody Labeling Kits

    Microscope image of fluorescently labeled SKBR3 Cells

    Invitrogen Zenon labeling technology rapidly conjugates antibodies to a variety of fluorochromes, even from minimal, unpurified sources like hybridoma culture supernatant. Designed to bind to the Fc portion of primary antibodies, Zenon fragments enable specific, noncovalent labeling of small antibody quantities without compromising antibody function. Zenon Alexa Fluor Plus labeling reagents merge Zenon technology's speed and scalability with the excellent performance of Alexa Fluor Plus dyes, offering an optimal system for screening antibody binding in therapeutic antibody discovery.

    • 5-minute incubation time
    • 1–20 µg primary antibody per labeling
    • Compatible with BSA and other stabilizing proteins
    • No purification step
    • Enables rapid screening of antibody binding
    • Preserves primary antibody function

    Invitrogen Zenon labeling reagents provide a quick and easy-to-use system to noncovalently label human, mouse, and rabbit IgG antibodies with a variety of fluorophores. Prelabeled Zenon Fab fragments are designed to rapidly bind to the Fc portion of IgG antibodies, preserving antibody function. Zenon Fab-antibody conjugation occurs in less than 5 minutes, with only a small amount of starting material needed and no purification steps required.

    Figure 6. Mouse or human IgGs are labeled with Zenon labeling reagents for 5 minutes at room temperature. Cells are treated with labeled IgG’s for as little as 30 minutes to detect surface antigens and up to 24 hours to look at antibody internalization. Imaging and quantification can then be detected and analyzed by flow cytometry, high content imaging, or live cell incubators.

    Using Zenon labeling reagents for rapid screening of antibody binding

    The Invitrogen Zenon Alexa Fluor Plus labeling reagents have been optimized to screen for antibody binding, giving a bright fluorescence-based indication of antibody binding. These reagents combine the rapid and scalable Zenon technology with the superior Alexa Fluor Plus fluorophores to provide a higher signal to noise ratio and to increase confidence in your screening results.

    Want to learn more about screening for binding of therapeutic antibodies?
    View our Scientific Poster for Antibody Labeling Reagents for Therapeutic Antibody Screening

    Figure 7. Various mouse and human IgGs were treated with Zenon Goat Anti-Human Alexa Fluor Plus Labeling Reagent. Following a 5-minute incubation, SKBR3 cells were treated with antibodies for 60 minutes and then screened on the CellInsight CX7 LED Pro for positive binding. Trastuzumab was the only antibody in this screen known to bind to the cell surface of SKBR3 cells.

    Zenon Antibody Labeling Kits for antibody binding

    Interested in screening for antibody internalization instead?
    See Zenon pHrodo Labeling Reagents


    Zenon Antibody Labeling Kits for multiplex immunofluorescence

    ReactivityTarget isotypeFind products
    MouseIgG1See all kits
    HumanIgGSee all kits
    RabbitIgGSee all kits

    Site-specific antibody labeling kits

    Click chemistry labeling with SiteClick Antibody Labeling Kits

    Drawing of an antibody with Alexa Fluor Dye attaching to Fc region of the antibody using site-click reaction.

    Thermo Fisher Scientific SiteClick labeling kits allow simple and gentle site-selective attachment of detection molecules to heavy chain N-linked glycans—far from the antigen-binding domain—providing excellent reproducibility from labeling to labeling and from antibody to antibody. A number of different detection molecules can be site-selectively attached to the heavy chain glycans—including phycobiliproteins (e.g., R-PE), QDot probes, Alexa Fluor dyes, pHrodo dye, metal-chelating compounds, and other small molecules like biotin—allowing multiplex analysis with antibodies from the same species. Features include:

    • Labeling of 100 μg up to 5 mg of antibody
    • Easy to follow step-by-step protocol
    • Highly efficient, site-specific, reproducible labeling chemistry
    • Kits and dyes available in a flexible format for easy design of multi-color experiments

    In general, IgG antibodies contain two N-linked glycans attached to specific conserved asparagine residues located in the antibody heavy chain Fc domain. These sugar chains, predominantly complex biantennary glycans with two terminal branches, are structurally quite homogeneous, and the terminal sequences of the glycan branches are highly consistent. Most of the antibody glycan branches terminate with galactose-N-acetylglucosamine (Gal-GlcNAc-) or with N-acetylglucosamine (GlcNAc-). Removal of the terminal Gal residue with β-galactosidase unmasks the majority of terminal GlcNAc labeling sites for the subsequent enzymatic β-galactosyl transferase (GalT) reaction (Figure 8). After cleavage of terminal Gal residues by β-galactosidase, each N-linked glycan will contain, on average, 2 terminal GlcNAc residues per heavy chain (4 terminal GlcNAc per antibody). The azide-activated antibody can now be labeled with a dibenzocyclooctyne (DIBO)-functionalized probe using copper-free click chemistry (Figure 9).

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      How to site-specifically label your antibody using SiteClick technology

      This video explains how to easily and site specifically label an antibody using an enzymatic and click chemistry approach. This method can be applied to any intact IgG antibody and requires no antibody engineering or complex methodology.

      Figure 8. The SiteClick Antibody Labeling Kits overview. The first step in the SiteClick antibody labeling process involves removal of terminal galactose residues from the heavy chain N-linked glycans of the antibody using β-galactosidase, exposing essentially all possible modifiable GlcNAc residues. Second, the free terminal GlcNAc residues are activated with azide tags by enzymatic attachment of GalNAz to the terminal GlcNAc residues using the GalT(Y289L) enzyme. In the third step, the azide residues are reacted with the dibenzocyclooctyne (DIBO)-functionalized probe of choice (e.g., Alexa Fluor 488 sDIBO alkyne) (see Figure 10 for this reaction). The average degree of labeling is 3–3.5 labels per antibody.
      Copper-less click chemistry azide/DIBO reaction
      Figure 9. Copper-less click chemistry azide/DIBO reaction. The azide and alkyne moieties are interchangeable. The molecule can be labeled with a DIBO and reacted with a fluorophore or hapten-azide.

      The SiteClick method is compatible with antibodies from a number of different species including, but not limited to, human, rabbit, mouse, rat, goat, hamster, and chicken. Additionally, SiteClick labeling is effective with several antibody classes such as IgG, IgM, and IgY; note that chicken IgY antibodies have 6 heavy chain glycans instead of 2 and therefore can be labeled to a higher extent.

      SiteClick antibody labeling system offers flexibility

      The SiteClick Antibody Labeling system is available in two formats:

      • Kits that contain both the azido modification components for preparing the antibody and a sDIBO alkyne to label the antibody (complete reaction featured in Figure 8A and B).
      • A kit that contains only the azido modification component (the first 2 steps of the reaction depicted in Figure 8A).
      • A variety of standalone sDIBO alkyne reagents that can be used to label the modified antibody (step in Figure 8B).

      This flexibility of formats allows several advantages including the ability to easily change the fluorescent dye used, without impacting the degree of labeling of the same antibody and the ability to prepare a large batch of modified antibody and label only a small amount as needed, again, preserving the consistency of degree of labeling and functionality.

      Antibody functionality is highly preserved

      The covalent and site-specific attachment of the dyes to the N-linked glycans on the antibody heavy chain Fc domain helps ensure the immunogenicity of the antigen binding site is preserved, resulting in more efficient binding to the antigen as compared to antibodies randomly labeled with amine-reactive dyes. In a side-by-side comparison of SiteClick-labeled and amine-reactive labeled anti-troponin 1 antibody, the sensitivity of the SiteClick-labeled antibody was greater than that of the amine-reactive labeled antibody (Figure 10).

      Figure 10. Comparison of SiteClick antibody labeling with amine-reactive antibody labeling in a bead-based sandwich assay. Anti-Troponin (Trpl) antibody capture beads were used and troponin antigen detection was performed using biotinylated anti-Trpl antibody labeled with either SiteClick system or amine-reactive system. Binding was detected using a streptavidin-mediated chemiluminescence assay.

      Lot-to-lot consistency in antibody degree of labeling

      Labeling antibodies with the SiteClick antibody labeling system helps give you confidence that the antibody will be labeled the same way every time, with no time needed for reaction optimization. This means the same number of dyes attached to each molecule, the same preservation of the antigen binding site, helping ensure the same results every time. An example of the consistency in labeling between different antibodies is shown in Figure 11.

      Figure 11. Lot-to- lot and antibody-to-antibody consistency. Twenty-eight different primary antibodies from different species were labeled by different users over a period of three years under the exact same conditions using the β-galactosidase-cleaved azide-activated antibodies and SiteClick Alexa Fluor 488 sDIBO Alkyne dye. The degree of labeling averaged 3.4±0.39, demonstrating the consistency of the SiteClick labeling system. See Table 1 for the types, species and antigenicity of these antibodies.

      Table 1. Antigenicity of primary antibodies labeled in degree of labeling study (Figure 11).

      Human IgG1Human IgG3Mouse IgG1Mouse IgG2aGoat Polyclonal
      EGFRLymphoma cellGD2CD4Apolipoprotein-A2
      HER2/neuGD3β-tubulinCD3 
      sLeasLeaCD8aCD8 
      GD2f-GM1CD45CD56 
      GM2TnC3b, iC3bC3b, iC3b, C3dg 
      J591 Interferon-γ  

      SiteClick Antibody Labeling Kits selection guide

      Product nameAntibody quantity labeledEx/Em*Cat. No.
      Kits for antibody modification only
      SiteClick Azido Modification Kit100 μgN/AS20026
      1 mgS10900
      5 mgS10901
      Standalone labeling reagents
      SiteClick Alexa Fluor 488 sDIBO Alkyne100 μg495/519C20027
      1 mgS10904
      5 mgS10909
      SiteClick Alexa Fluor 555 sDIBO Alkyne100 μg555/565C20028
      SiteClick Alexa Fluor 647 sDIBO Alkyne100 μg650/665C20029
      1 mgS10906
      5 mgS10911
      SiteClick iFL pHrodo Red sDIBO Alkyne100 μg560/585C20034
      1 mgS10903
      5 mgS10908
      SiteClick iFL pHrodo Deep Red sDIBO Alkyne100 μg640/655S10914
      1 mgS10915
      SiteClick Biotin sDIBO Alkyne100 μgN/AC20030
      1 mgS10902
      5 mgS10907
      SiteClick Amine sDIBO Alkyne100 μgN/AC20031
      Kits containing antibody modification + labeling reagent
      SiteClick R-PE Antibody Labeling kit100 μg565/578S10467
      SiteClick Qdot 525 Antibody Labeling kit100 μg405/525S10449
      SiteClick Qdot 565 Antibody Labeling kit100 μg405/565S10450
      SiteClick Qdot 585 Antibody Labeling kit100 μg405/585S10451
      SiteClick Qdot 605 Antibody Labeling kit100 μg405/605S10469
      SiteClick Qdot 625 Antibody Labeling kit100 μg405/625S10452
      SiteClick Qdot 655 Antibody Labeling kit100 μg405/655S10453
      SiteClick Qdot 705 Antibody Labeling kit100 μg405/705S10454
      SiteClick Qdot 800 Antibody Labeling kit100 μg405/800S10455
      SiteClick Biotin Antibody Labeling Kit100 μgN/AS20033

      *Ex/Em = Fluorescence excitation and emission maxima, in nm.
      Find more information about Alexa Fluor dyes and other fluorophores in the Fluorophore Selection Guide

      Ordering information for antibody modification only kits

      Ordering information for standalone labeling reagents

      For Research Use Only. Not for use in diagnostic procedures.