Thermo Scientific Molecular Cloning

Molecular cloning, a key component of the molecular biology workflow, is used to assemble recombinant DNA molecules and to direct their replication. In the molecular cloning workflow, the DNA to be cloned is identified and treated with enzymes to generate DNA fragments. These fragments are then combined with vector DNA to generate recombinant DNA molecules.

Learn more about the high-quality PCR cloning kits, bacterial expression and ligase-independent cloning kits, enzymes, competent cells, and DNA vectors you need for efficient molecular cloning.

PCR cloning workflow reagents

Thermo Scientific DH10B, DH5α, and BL21(DE3) competent cells are produced with stringent quality control to enable reliable, consistent performance in cloning workflows. Thermo Scientific DH10B competent cells are also included in the Thermo Scientific CloneJET PCR Cloning Kit and in the Thermo Scientific Phusion Site-Directed Mutagenesis Kit.

Ligation- independent cloning (LIC)

Designed for fast and efficient LIC and tight regulation of gene expression in E. coli. LIC enables high-cloning efficiencies of more than 95% and eliminates the need for restriction enzyme digestion and ligation steps.

DNA ligation and end repair

Molecular Cloning Enzymes and Reagents

Thermo Scientific competent cells are produced with stringent quality control to enable reliable, consistent performance in cloning workflows.

Ordering information

Catalog # Name Size Price (USD) Qty
EC0113 DH10B Competent Cells Each
193.00
EC0112 DH5α Competent Cells Each
144.65

Online Exclusive

167.00
Save 22.35 (13%)
EC0111 DH5α Competent Cells for Subcloning Each
66.65

Online Exclusive

77.25
Save 10.60 (14%)
EC0114 BL21(DE3) Competent Cells Each
166.00
K123120 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 20 Reactions Each
305.65

Online Exclusive

345.00
Save 39.35 (11%)
K123240 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 40 Reactions Each
557.65

Online Exclusive

648.00
Save 90.35 (14%)
F542 Phusion™ Site-Directed Mutagenesis Kit with DH10B Competent Cells Each
373.65

Online Exclusive

410.00
Save 36.35 (9%)

Enzymes for modification of DNA ends, such as T4 DNA ligase, alkaline phosphatase, PNK, Klenow fragment and T4 DNA Polymerase.

Ordering information

Catalog # Name Size Price (USD) Qty
EF0654 FastAP Thermosensitive Alkaline Phosphatase (1 U/μL), 300 units Each
52.65

Online Exclusive

58.25
Save 5.60 (10%)
EP0051 Klenow Fragment (10 U/μL), 300 units Each
129.65

Online Exclusive

147.00
Save 17.35 (12%)
EP0054 Klenow Fragment, LC (2 U/μL) Each
153.00
EN0321 S1 Nuclease (100 U/μL) Each
69.65

Online Exclusive

87.25
Save 17.60 (20%)
EL0014 T4 DNA Ligase (5 U/μL), 200 units Each
80.65

Online Exclusive

94.25
Save 13.60 (14%)
EL0013 T4 DNA Ligase, HC (30 U/μL) Each
1,023.65

Online Exclusive

1,116.00
Save 92.35 (8%)
EL0016 T4 DNA Ligase, LC (1 U/μL) Each
241.65

Online Exclusive

298.00
Save 56.35 (19%)
EP0061 T4 DNA Polymerase (5 U/μL), 100 units Each
66.65

Online Exclusive

74.00
Save 7.35 (10%)
EK0031 T4 Polynucleotide Kinase (10 U/μL), 500 units Each
62.65

Online Exclusive

73.75
Save 11.10 (15%)

IPTG and X-gal for blue/white colony selection.

Ordering information

Catalog # Name Size Price (USD) Qty
R1021 EDTA (0.5 M), pH 8.0 Each
24.65

Online Exclusive

30.26
Save 5.61 (19%)
R1181 Sodium Acetate Solution (3 M), pH 5.2 Each
27.65

Online Exclusive

31.17
Save 3.52 (11%)
R0811 5-Fluoroorotic Acid, 1 g Each
107.65

Online Exclusive

135.00
Save 27.35 (20%)
R0601 DEPC-treated Water, 30 mL Each
49.65

Online Exclusive

55.50
Save 5.85 (11%)
R0582 Water, nuclease-free, 30 mL Each
42.65

Online Exclusive

49.54
Save 6.89 (14%)
R0861 DTT (dithiothreitol), 5 g Each
114.65

Online Exclusive

133.00
Save 18.35 (14%)
707265ML USB Dithiothreitol (DTT), 0.1M Solution Each
135.65

Online Exclusive

150.00
Save 14.35 (10%)
R0551 Glycogen, RNA grade Each
100.65

Online Exclusive

115.00
Save 14.35 (12%)
R1171 IPTG Solution, ready-to-use Each
89.65

Online Exclusive

110.00
Save 20.35 (19%)
R0491 TopVision Agarose, 100 g Each
145.65

Online Exclusive

186.00
Save 40.35 (22%)
R0801 TopVision Low Melting Point Agarose Each
155.65

Online Exclusive

202.00
Save 46.35 (23%)
R2801 TopVision Agarose Tablets, 200 Tablets (0.5 g each) Each
156.65

Online Exclusive

197.00
Save 40.35 (20%)
R0941 X-Gal Solution, ready-to-use Each
152.65

Online Exclusive

177.00
Save 24.35 (14%)
R0851 X-Gluc, 0.1 g Each
263.65

Online Exclusive

313.00
Save 49.35 (16%)

pUC plasmid and lambda DNA for use as molecular cloning vectors.

Ordering information

Catalog # Name Size Price (USD) Qty
SD0011 Lambda DNA 500 µg
145.65

Online Exclusive

178.00
Save 32.35 (18%)
SD0021 Lambda DNA (dam–, dcm–) 500 µg
148.65

Online Exclusive

171.00
Save 22.35 (13%)
SD0041 pBR322 Plasmid DNA 100 µg
145.65

Online Exclusive

181.00
Save 35.35 (20%)
SD0031 phiX174 RF1 DNA 50 µg
170.00
SD0141 pTZ19R DNA 50 µg
185.65

Online Exclusive

235.00
Save 49.35 (21%)
SD0051 pUC18 DNA 50 µg
107.00
SD0061 pUC19 DNA 50 µg
94.65

Online Exclusive

108.00
Save 13.35 (12%)
SD0171 pUC57 DNA 50 µg
105.00

Thermo Scientific competent cells are produced with stringent quality control to enable reliable, consistent performance in cloning workflows.

Ordering information

Catalog # Name Size Price (USD) Qty
EC0113 DH10B Competent Cells Each
193.00
EC0112 DH5α Competent Cells Each
144.65

Online Exclusive

167.00
Save 22.35 (13%)
EC0111 DH5α Competent Cells for Subcloning Each
66.65

Online Exclusive

77.25
Save 10.60 (14%)
EC0114 BL21(DE3) Competent Cells Each
166.00
K123120 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 20 Reactions Each
305.65

Online Exclusive

345.00
Save 39.35 (11%)
K123240 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 40 Reactions Each
557.65

Online Exclusive

648.00
Save 90.35 (14%)
F542 Phusion™ Site-Directed Mutagenesis Kit with DH10B Competent Cells Each
373.65

Online Exclusive

410.00
Save 36.35 (9%)

Enzymes for modification of DNA ends, such as T4 DNA ligase, alkaline phosphatase, PNK, Klenow fragment and T4 DNA Polymerase.

Ordering information

Catalog # Name Size Price (USD) Qty
EF0654 FastAP Thermosensitive Alkaline Phosphatase (1 U/μL), 300 units Each
52.65

Online Exclusive

58.25
Save 5.60 (10%)
EP0051 Klenow Fragment (10 U/μL), 300 units Each
129.65

Online Exclusive

147.00
Save 17.35 (12%)
EP0054 Klenow Fragment, LC (2 U/μL) Each
153.00
EN0321 S1 Nuclease (100 U/μL) Each
69.65

Online Exclusive

87.25
Save 17.60 (20%)
EL0014 T4 DNA Ligase (5 U/μL), 200 units Each
80.65

Online Exclusive

94.25
Save 13.60 (14%)
EL0013 T4 DNA Ligase, HC (30 U/μL) Each
1,023.65

Online Exclusive

1,116.00
Save 92.35 (8%)
EL0016 T4 DNA Ligase, LC (1 U/μL) Each
241.65

Online Exclusive

298.00
Save 56.35 (19%)
EP0061 T4 DNA Polymerase (5 U/μL), 100 units Each
66.65

Online Exclusive

74.00
Save 7.35 (10%)
EK0031 T4 Polynucleotide Kinase (10 U/μL), 500 units Each
62.65

Online Exclusive

73.75
Save 11.10 (15%)

IPTG and X-gal for blue/white colony selection.

Ordering information

Catalog # Name Size Price (USD) Qty
R1021 EDTA (0.5 M), pH 8.0 Each
24.65

Online Exclusive

30.26
Save 5.61 (19%)
R1181 Sodium Acetate Solution (3 M), pH 5.2 Each
27.65

Online Exclusive

31.17
Save 3.52 (11%)
R0811 5-Fluoroorotic Acid, 1 g Each
107.65

Online Exclusive

135.00
Save 27.35 (20%)
R0601 DEPC-treated Water, 30 mL Each
49.65

Online Exclusive

55.50
Save 5.85 (11%)
R0582 Water, nuclease-free, 30 mL Each
42.65

Online Exclusive

49.54
Save 6.89 (14%)
R0861 DTT (dithiothreitol), 5 g Each
114.65

Online Exclusive

133.00
Save 18.35 (14%)
707265ML USB Dithiothreitol (DTT), 0.1M Solution Each
135.65

Online Exclusive

150.00
Save 14.35 (10%)
R0551 Glycogen, RNA grade Each
100.65

Online Exclusive

115.00
Save 14.35 (12%)
R1171 IPTG Solution, ready-to-use Each
89.65

Online Exclusive

110.00
Save 20.35 (19%)
R0491 TopVision Agarose, 100 g Each
145.65

Online Exclusive

186.00
Save 40.35 (22%)
R0801 TopVision Low Melting Point Agarose Each
155.65

Online Exclusive

202.00
Save 46.35 (23%)
R2801 TopVision Agarose Tablets, 200 Tablets (0.5 g each) Each
156.65

Online Exclusive

197.00
Save 40.35 (20%)
R0941 X-Gal Solution, ready-to-use Each
152.65

Online Exclusive

177.00
Save 24.35 (14%)
R0851 X-Gluc, 0.1 g Each
263.65

Online Exclusive

313.00
Save 49.35 (16%)

pUC plasmid and lambda DNA for use as molecular cloning vectors.

Ordering information

Catalog # Name Size Price (USD) Qty
SD0011 Lambda DNA 500 µg
145.65

Online Exclusive

178.00
Save 32.35 (18%)
SD0021 Lambda DNA (dam–, dcm–) 500 µg
148.65

Online Exclusive

171.00
Save 22.35 (13%)
SD0041 pBR322 Plasmid DNA 100 µg
145.65

Online Exclusive

181.00
Save 35.35 (20%)
SD0031 phiX174 RF1 DNA 50 µg
170.00
SD0141 pTZ19R DNA 50 µg
185.65

Online Exclusive

235.00
Save 49.35 (21%)
SD0051 pUC18 DNA 50 µg
107.00
SD0061 pUC19 DNA 50 µg
94.65

Online Exclusive

108.00
Save 13.35 (12%)
SD0171 pUC57 DNA 50 µg
105.00

Other molecular cloning products

Complete your molecular biology workflow

DNA ladders

Wide range of DNA Ladders for accurate DNA sizing and quantification in agarose or polyacrylamide gels.

dNTPs, NTPs and modified nucleotides

High purity nucleotides for DNA polymerization reactions.

cDNA synthesis kits

Reverse transcriptases, primers, nucleotides and and kits for efficient cDNA synthesis.

High-fidelity DNA polymerases and master mixes

Phusion High-Fidelity DNA Polymerases, kits and master mixes.

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    Video: How to achieve fast and efficient ligation

    How to video to demonstrate how to achieve fast and efficient ligation as part of a cloning workflow using the Thermo Scientific Rapid DNA Ligation Kit.