Thermo Scientific Molecular Cloning

Molecular cloning, a key component of the molecular biology workflow, is used to assemble recombinant DNA molecules and to direct their replication. In the molecular cloning workflow, the DNA to be cloned is identified and treated with enzymes to generate DNA fragments. These fragments are then combined with vector DNA to generate recombinant DNA molecules.

Learn more about the high-quality PCR cloning kits, bacterial expression and ligase-independent cloning kits, enzymes, competent cells, and DNA vectors you need for efficient molecular cloning.

PCR cloning workflow reagents

Thermo Scientific DH10B, DH5α, and BL21(DE3) competent cells are produced with stringent quality control to enable reliable, consistent performance in cloning workflows. Thermo Scientific DH10B competent cells are also included in the Thermo Scientific CloneJET PCR Cloning Kit and in the Thermo Scientific Phusion Site-Directed Mutagenesis Kit.

Ligation- independent cloning (LIC)

Designed for fast and efficient LIC and tight regulation of gene expression in E. coli. LIC enables high-cloning efficiencies of more than 95% and eliminates the need for restriction enzyme digestion and ligation steps.

DNA ligation and end repair

Molecular Cloning Enzymes and Reagents

Thermo Scientific competent cells are produced with stringent quality control to enable reliable, consistent performance in cloning workflows.

Ordering information

Catalog # Name Size Price (USD) Qty
EC0113 DH10B Competent Cells Each
187.00
EC0112 DH5α Competent Cells Each
140.65

Online exclusive

162.00
Save 21.35 (13%)
EC0111 DH5α Competent Cells for Subcloning Each
64.65

Online exclusive

75.00
Save 10.35 (14%)
EC0114 BL21(DE3) Competent Cells Each
161.00
K123120 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 20 Reactions Each
286.65

Online exclusive

324.00
Save 37.35 (12%)
K123240 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 40 Reactions Each
523.65

Online exclusive

608.00
Save 84.35 (14%)
F542 Phusion™ Site-Directed Mutagenesis Kit with DH10B Competent Cells Each
350.65

Online exclusive

385.00
Save 34.35 (9%)

Enzymes for modification of DNA ends, such as T4 DNA ligase, alkaline phosphatase, PNK, Klenow fragment and T4 DNA Polymerase.

Ordering information

Catalog # Name Size Price (USD) Qty
EF0654 FastAP Thermosensitive Alkaline Phosphatase (1 U/μL), 300 units Each
49.65

Online exclusive

54.75
Save 5.10 (9%)
EP0051 Klenow Fragment (10 U/μL), 300 units Each
121.65

Online exclusive

138.00
Save 16.35 (12%)
EP0054 Klenow Fragment, LC (2 U/μL) Each
144.00
EN0321 S1 Nuclease (100 U/μL) Each
65.65

Online exclusive

82.00
Save 16.35 (20%)
78303Z500UN Topoisomerase II, Alpha 500 units -
EL0014 T4 DNA Ligase (5 U/μL), 200 units Each
75.65

Online exclusive

88.50
Save 12.85 (15%)
EL0013 T4 DNA Ligase, HC (30 U/μL) Each
960.65

Online exclusive

1,048.00
Save 87.35 (8%)
EL0016 T4 DNA Ligase, LC (1 U/μL) Each
226.65

Online exclusive

280.00
Save 53.35 (19%)
EP0061 T4 DNA Polymerase (5 U/μL), 100 units Each
62.65

Online exclusive

69.50
Save 6.85 (10%)
EK0031 T4 Polynucleotide Kinase (10 U/μL), 500 units Each
58.65

Online exclusive

69.25
Save 10.60 (15%)

IPTG and X-gal for blue/white colony selection.

Ordering information

Catalog # Name Size Price (USD) Qty
R1021 EDTA (0.5 M), pH 8.0 Each
22.65

Online exclusive

28.41
Save 5.76 (20%)
R1181 Sodium Acetate Solution (3 M), pH 5.2 Each
25.65

Online exclusive

29.27
Save 3.62 (12%)
R0811 5-Fluoroorotic Acid, 1 g Each
100.65

Online exclusive

127.00
Save 26.35 (21%)
R0601 DEPC-treated Water, 30 mL Each
46.65

Online exclusive

52.00
Save 5.35 (10%)
R0582 Water, nuclease-free, 30 mL Each
39.65

Online exclusive

46.52
Save 6.87 (15%)
R0861 DTT (dithiothreitol), 5 g Each
107.65

Online exclusive

125.00
Save 17.35 (14%)
707265ML USB Dithiothreitol (DTT), 0.1M Solution Each
127.65

Online exclusive

141.00
Save 13.35 (9%)
R0551 Glycogen, RNA grade Each
94.65

Online exclusive

108.00
Save 13.35 (12%)
R1171 IPTG Solution, ready-to-use Each
83.65

Online exclusive

103.00
Save 19.35 (19%)
R0391 IPTG, dioxane-free 1 g -
R0491 TopVision Agarose, 100 g Each
136.65

Online exclusive

175.00
Save 38.35 (22%)
R0801 TopVision Low Melting Point Agarose Each
146.65

Online exclusive

190.00
Save 43.35 (23%)
R2801 TopVision Agarose Tablets, 200 Tablets (0.5 g each) Each
146.65

Online exclusive

185.00
Save 38.35 (21%)
R0401 X-Gal 0.5 g -
R0941 X-Gal Solution, ready-to-use Each
142.65

Online exclusive

166.00
Save 23.35 (14%)
R0851 X-Gluc, 0.1 g Each
247.65

Online exclusive

294.00
Save 46.35 (16%)

pUC plasmid and lambda DNA for use as molecular cloning vectors.

Ordering information

Catalog # Name Size Price (USD) Qty
SD0011 Lambda DNA 500 µg
136.65

Online exclusive

167.00
Save 30.35 (18%)
SD0021 Lambda DNA (dam–, dcm–) 500 µg
139.65

Online exclusive

161.00
Save 21.35 (13%)
SD0041 pBR322 Plasmid DNA 100 µg
136.65

Online exclusive

170.00
Save 33.35 (20%)
SD0031 phiX174 RF1 DNA 50 µg
160.00
SD0141 pTZ19R DNA 50 µg
174.65

Online exclusive

221.00
Save 46.35 (21%)
SD0051 pUC18 DNA 50 µg
100.00
SD0061 pUC19 DNA 50 µg
88.65

Online exclusive

101.00
Save 12.35 (12%)
SD0171 pUC57 DNA 50 µg
99.00

Thermo Scientific competent cells are produced with stringent quality control to enable reliable, consistent performance in cloning workflows.

Ordering information

Catalog # Name Size Price (USD) Qty
EC0113 DH10B Competent Cells Each
187.00
EC0112 DH5α Competent Cells Each
140.65

Online exclusive

162.00
Save 21.35 (13%)
EC0111 DH5α Competent Cells for Subcloning Each
64.65

Online exclusive

75.00
Save 10.35 (14%)
EC0114 BL21(DE3) Competent Cells Each
161.00
K123120 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 20 Reactions Each
286.65

Online exclusive

324.00
Save 37.35 (12%)
K123240 CloneJET™ PCR Cloning Kit with DH10B Competent Cells, 40 Reactions Each
523.65

Online exclusive

608.00
Save 84.35 (14%)
F542 Phusion™ Site-Directed Mutagenesis Kit with DH10B Competent Cells Each
350.65

Online exclusive

385.00
Save 34.35 (9%)

Enzymes for modification of DNA ends, such as T4 DNA ligase, alkaline phosphatase, PNK, Klenow fragment and T4 DNA Polymerase.

Ordering information

Catalog # Name Size Price (USD) Qty
EF0654 FastAP Thermosensitive Alkaline Phosphatase (1 U/μL), 300 units Each
49.65

Online exclusive

54.75
Save 5.10 (9%)
EP0051 Klenow Fragment (10 U/μL), 300 units Each
121.65

Online exclusive

138.00
Save 16.35 (12%)
EP0054 Klenow Fragment, LC (2 U/μL) Each
144.00
EN0321 S1 Nuclease (100 U/μL) Each
65.65

Online exclusive

82.00
Save 16.35 (20%)
78303Z500UN Topoisomerase II, Alpha 500 units -
EL0014 T4 DNA Ligase (5 U/μL), 200 units Each
75.65

Online exclusive

88.50
Save 12.85 (15%)
EL0013 T4 DNA Ligase, HC (30 U/μL) Each
960.65

Online exclusive

1,048.00
Save 87.35 (8%)
EL0016 T4 DNA Ligase, LC (1 U/μL) Each
226.65

Online exclusive

280.00
Save 53.35 (19%)
EP0061 T4 DNA Polymerase (5 U/μL), 100 units Each
62.65

Online exclusive

69.50
Save 6.85 (10%)
EK0031 T4 Polynucleotide Kinase (10 U/μL), 500 units Each
58.65

Online exclusive

69.25
Save 10.60 (15%)

IPTG and X-gal for blue/white colony selection.

Ordering information

Catalog # Name Size Price (USD) Qty
R1021 EDTA (0.5 M), pH 8.0 Each
22.65

Online exclusive

28.41
Save 5.76 (20%)
R1181 Sodium Acetate Solution (3 M), pH 5.2 Each
25.65

Online exclusive

29.27
Save 3.62 (12%)
R0811 5-Fluoroorotic Acid, 1 g Each
100.65

Online exclusive

127.00
Save 26.35 (21%)
R0601 DEPC-treated Water, 30 mL Each
46.65

Online exclusive

52.00
Save 5.35 (10%)
R0582 Water, nuclease-free, 30 mL Each
39.65

Online exclusive

46.52
Save 6.87 (15%)
R0861 DTT (dithiothreitol), 5 g Each
107.65

Online exclusive

125.00
Save 17.35 (14%)
707265ML USB Dithiothreitol (DTT), 0.1M Solution Each
127.65

Online exclusive

141.00
Save 13.35 (9%)
R0551 Glycogen, RNA grade Each
94.65

Online exclusive

108.00
Save 13.35 (12%)
R1171 IPTG Solution, ready-to-use Each
83.65

Online exclusive

103.00
Save 19.35 (19%)
R0391 IPTG, dioxane-free 1 g -
R0491 TopVision Agarose, 100 g Each
136.65

Online exclusive

175.00
Save 38.35 (22%)
R0801 TopVision Low Melting Point Agarose Each
146.65

Online exclusive

190.00
Save 43.35 (23%)
R2801 TopVision Agarose Tablets, 200 Tablets (0.5 g each) Each
146.65

Online exclusive

185.00
Save 38.35 (21%)
R0401 X-Gal 0.5 g -
R0941 X-Gal Solution, ready-to-use Each
142.65

Online exclusive

166.00
Save 23.35 (14%)
R0851 X-Gluc, 0.1 g Each
247.65

Online exclusive

294.00
Save 46.35 (16%)

pUC plasmid and lambda DNA for use as molecular cloning vectors.

Ordering information

Catalog # Name Size Price (USD) Qty
SD0011 Lambda DNA 500 µg
136.65

Online exclusive

167.00
Save 30.35 (18%)
SD0021 Lambda DNA (dam–, dcm–) 500 µg
139.65

Online exclusive

161.00
Save 21.35 (13%)
SD0041 pBR322 Plasmid DNA 100 µg
136.65

Online exclusive

170.00
Save 33.35 (20%)
SD0031 phiX174 RF1 DNA 50 µg
160.00
SD0141 pTZ19R DNA 50 µg
174.65

Online exclusive

221.00
Save 46.35 (21%)
SD0051 pUC18 DNA 50 µg
100.00
SD0061 pUC19 DNA 50 µg
88.65

Online exclusive

101.00
Save 12.35 (12%)
SD0171 pUC57 DNA 50 µg
99.00

Other molecular cloning products

Complete your molecular biology workflow

DNA ladders

Wide range of DNA Ladders for accurate DNA sizing and quantification in agarose or polyacrylamide gels.

dNTPs, NTPs and modified nucleotides

High purity nucleotides for DNA polymerization reactions.

cDNA synthesis kits

Reverse transcriptases, primers, nucleotides and and kits for efficient cDNA synthesis.

High-fidelity DNA polymerases and master mixes

Phusion High-Fidelity DNA Polymerases, kits and master mixes.

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      Video: How to achieve fast and efficient ligation

      How to video to demonstrate how to achieve fast and efficient ligation as part of a cloning workflow using the Thermo Scientific Rapid DNA Ligation Kit.